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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Jason Stapp | 8th | Justin Suter | 8th | 6th |
| First Basemen | Ronnie Collins | 16th | Bartolomeo Murri | 15th | 18th |
| Second Basemen | Bobby Ramos | 18th | Fabrizio Nardini | 16th | 16th |
| Third Basemen | Nicolo Cadaloba | 4th | Joe Cowling | 16th | 16th |
| Shortstops | Ernesto Moreno | 6th | Tied for 12th | 14th | |
| Left Fielders | Danny Munoz | 8th | Alberto Avila | 1st | 3rd |
| Center Fielders | Matt Eddy | 20th | Matt Eddy | Tied for 4th | 6th |
| Right Fielders | Matthew Franklin | 2nd | Jacques Borcharding | 9th | 8th |
| Starting Pitchers | Omar Sanchez | 17th | 20th | 20th | |
| Relievers | Jadon McClendon | 4th | Daniel Webb | Tied for 14th | 8th |
| Closers | Chris Miller | 6th | Daniel Webb | 11th | 8th |
