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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Eddie Dimitroff | 20th | Kurt Maley | 4th | 11th |
| First Basemen | Joel Peterson | 4th | Wil Moulton | 9th | 4th |
| Second Basemen | Tom Shelton | 8th | Jonathan Carlson | 5th | 7th |
| Third Basemen | David Waters | 14th | Bernie Valdez | 5th | 8th |
| Shortstops | Bubba Marino | 15th | Ivan Vega | 8th | 11th |
| Left Fielders | Edwin Sanchez | 1st | John McKinney | Tied for 13th | 1st |
| Center Fielders | Jordan Blackwell | 2nd | Chris Juarez | 4th | 2nd |
| Right Fielders | Jay Clinkscales | 7th | Al DeMatto | 1st | 4th |
| Starting Pitchers | Jason Zierer | 2nd | Armando Hernandez | 23rd | 14th |
| Relievers | Josh Kingsbury | 10th | Adam Gilmore | 9th | 9th |
| Closers | Jason McNeal | 6th | Adam Gilmore | 1st | 5th |
