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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Matt Longo | 12th | Pierrick Falconieri | 16th | 15th |
| First Basemen | Seigo Yamamoto | 4th | Juan Tineo | 15th | 14th |
| Second Basemen | Dan Criddle | 13th | Jim Magee | 16th | 14th |
| Third Basemen | Zadkiel Ryans | 4th | Robby Martinez | 15th | 14th |
| Shortstops | Andy Boyd | 8th | 15th | 15th | |
| Left Fielders | Eddie Stevenson | 3rd | 16th | 16th | |
| Center Fielders | Aaron Defoe | 13th | 16th | 16th | |
| Right Fielders | Todd Ingalls | 11th | Kyle Sylvester | 15th | 14th |
| Starting Pitchers | Chris Alcaro | 15th | Ryan Daniels | 15th | 16th |
| Relievers | Jonathan Glass | 15th | Felix Alvira | 15th | 16th |
| Closers | Ryan Hunter | 16th | Josh Thomas | 10th | 13th |
