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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Troy Blackwell | 19th | Kurt Maley | 13th | 14th |
| First Basemen | Sam Chapman | 16th | Wil Moulton | 6th | 13th |
| Second Basemen | Tom Shelton | 8th | Marc Everett | 9th | 6th |
| Third Basemen | Bernie Valdez | 14th | Bernie Valdez | Tied for 14th | 13th |
| Shortstops | Pat Houle | 8th | Ivan Vega | 2nd | 5th |
| Left Fielders | Edwin Sanchez | 3rd | Juan Frausto | Tied for 12th | 1st |
| Center Fielders | Jordan Blackwell | 1st | Chris Juarez | 1st | 1st |
| Right Fielders | Jay Clinkscales | 8th | Al DeMatto | Tied for 11th | 5th |
| Starting Pitchers | Jon Naugle | 2nd | Matt Bartz | 2nd | 2nd |
| Relievers | Justin Mims | 24th | Nicholas Fox | 4th | 16th |
| Closers | Jason McNeal | 2nd | Nicholas Fox | 1st | 2nd |
