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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Josh Johnson | 12th | Tied for 22nd | 23rd | |
| First Basemen | David Orozco | 23rd | Jon Kaplansky | 3rd | 18th |
| Second Basemen | Scott Washington | 21st | Frank Covarrubiois | 21st | 21st |
| Third Basemen | Andrew O'Neal | 15th | Chris Manship | 19th | 19th |
| Shortstops | Zachary Bridges | 14th | Eric Wheeler | 13th | 11th |
| Left Fielders | Sam Cahoon | 7th | Nate Garner | Tied for 15th | 7th |
| Center Fielders | Ruben Silva | 1st | Juan Rodriguez | 19th | 1st |
| Right Fielders | Adam Thorson | 13th | Jon Kirby | Tied for 8th | 12th |
| Starting Pitchers | Manny Mercado | 20th | Daniel Smith | 19th | 21st |
| Relievers | Junro Yano | 9th | Justin Keeler | 12th | 11th |
| Closers | Junro Yano | 15th | Nick Cyr | Tied for 14th | 14th |
