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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Robert DeRosa | 7th | Troy Blackwell | 4th | 5th |
| First Basemen | Joel Peterson | 13th | Sam Chapman | 1st | 7th |
| Second Basemen | Brandon Hicks | 4th | Rafael Paez | 13th | 5th |
| Third Basemen | David Waters | 5th | Bernie Valdez | 12th | 5th |
| Shortstops | Abel Smith | 2nd | Jorge Martinez | 1st | 1st |
| Left Fielders | Yuri Uhrik | 18th | Juan Frausto | Tied for 12th | 15th |
| Center Fielders | Jordan Blackwell | 7th | Edwin Sanchez | 6th | 6th |
| Right Fielders | Jay Clinkscales | 6th | Adrian Gentile | Tied for 9th | 5th |
| Starting Pitchers | Sergio Hernandez | 4th | Henrik Kuehnemund | 14th | 5th |
| Relievers | Josh Kingsbury | 1st | Jason McNeal | 13th | 4th |
| Closers | Nick Van Deventer | 22nd | Jason McNeal | 5th | 14th |
