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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Justin Andera | 19th | Brent Cooper | 18th | 21st |
| First Basemen | Wilpert Apfel | 22nd | Colin Helms | 14th | 16th |
| Second Basemen | G.G. Hayashi | 15th | Rick Branco | Tied for 15th | 15th |
| Third Basemen | Steve Morgan | 14th | Tied for 20th | 19th | |
| Shortstops | Edgar Perez | 16th | Jose Razo | Tied for 16th | 15th |
| Left Fielders | Adam Langley | Tied for 18th | Tied for 22nd | 24th | |
| Center Fielders | Sincere Armstrong | 21st | Seth Waters | 24th | 24th |
| Right Fielders | Jon Nelson | 19th | Alberto Avila | 19th | 20th |
| Starting Pitchers | Danny Brannigan | 15th | Kevin Pasour | 21st | 18th |
| Relievers | Jonathan Benders | 18th | Marshall DiRosa | 20th | 22nd |
| Closers | Mike Brodsky | 12th | Marshall DiRosa | Tied for 15th | 11th |
