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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Tony McLaughlin | 8th | Chris Diaz | Tied for 9th | 8th |
| First Basemen | Adolfo Milagres | 6th | Antonio Garcia | Tied for 8th | 5th |
| Second Basemen | John Thomas | 5th | Josue Delgado | 2nd | 4th |
| Third Basemen | Wade Brett | 10th | Matt Durgan | 7th | 8th |
| Shortstops | Abe Martuza | 4th | Tim Haston | 11th | 4th |
| Left Fielders | Felix van Aken | 6th | Wilson Jaso | 3rd | 3rd |
| Center Fielders | David Eberle | 13th | Jose Echevarria | 5th | 12th |
| Right Fielders | Ricardo Hernandez | 4th | Reggie Muha | 1st | 3rd |
| Starting Pitchers | Mark Black | 1st | Bobby Cates | 13th | 2nd |
| Relievers | Quincy Brooks | 10th | Kyle Fisher | 8th | 6th |
| Closers | Won-keun Baek | 5th | Tony Hanner | 20th | 21st |
