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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Jay Qualls | 4th | Mike Smith | Tied for 10th | 2nd |
| First Basemen | Jorge Moreno | Tied for 10th | Tied for 16th | 17th | |
| Second Basemen | Jon Schmidt | 10th | Chris Murphy | Tied for 4th | 8th |
| Third Basemen | Jeff Thornton | 9th | Wang Kwan | 13th | 13th |
| Shortstops | Tim Maxwell | 12th | Tim Maxwell | Tied for 2nd | 3rd |
| Left Fielders | Cody Vannette | 6th | Joshua Hayden | 2nd | 4th |
| Center Fielders | Matt Harrington | 11th | Roelof Evans | 13th | 11th |
| Right Fielders | George Pickens | 2nd | Byron King | 12th | 7th |
| Starting Pitchers | Hector de la Roca | 16th | Kyle Balmaseda | 4th | 14th |
| Relievers | Markus Niemikorpi | 9th | Joe Elsen | Tied for 11th | 13th |
| Closers | Markus Niemikorpi | 11th | Kyle Balmaseda | Tied for 2nd | 9th |
