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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Brandon Lukens | 18th | David Sandoval | 15th | 18th |
| First Basemen | Billy Redfearn | 18th | Gerard Oosterveld | 1st | 18th |
| Second Basemen | Brad Woodall | 6th | Justin Shelton | 10th | 6th |
| Third Basemen | Sergio Lopez | 16th | Erwin Lecourt | 12th | 16th |
| Shortstops | Todd Parnell | 12th | Jared Doane | 18th | 12th |
| Left Fielders | Danny Martinez | 5th | Luis Reyes | 5th | 4th |
| Center Fielders | Kamar Jackson | 6th | Frank Ferguson | 13th | 6th |
| Right Fielders | Morgan Hawkey | 17th | Andrew Middleton | 18th | 17th |
| Starting Pitchers | Christian Goyer | 15th | Ben Cairns | 6th | 14th |
| Relievers | Alfredo Castillo | 18th | Jason Driskell | 12th | 17th |
| Closers | Bill James | 16th | Chris McCarty | 15th | 17th |
