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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Dave Bracey | 5th | Kesanori Takahashi | 16th | 6th |
| First Basemen | Tony Parker | 10th | George Hendriks | 5th | 9th |
| Second Basemen | Bryce Goolsby | 7th | Andre Fowler | 7th | 7th |
| Third Basemen | Jeff Schroeder | 7th | Francisco Canales | Tied for 4th | 7th |
| Shortstops | Matt Weber | 4th | Matt Weber | 7th | 4th |
| Left Fielders | Ian Hoch | 5th | Salvador Reyes | 13th | 6th |
| Center Fielders | Mendel Ederveen | 5th | Ben Haughton | 4th | 5th |
| Right Fielders | Will Bruhn | 2nd | Andy Hernandez | 8th | 2nd |
| Starting Pitchers | Phil Van Haren | 8th | Adam Samuel | 18th | 9th |
| Relievers | Jesse Fiefield | 11th | Juan Garcia | 10th | 11th |
| Closers | Ze-dong Phan | 7th | Juan Garcia | 3rd | 6th |
