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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Mark Buchholz | 11th | Arturo O'Quinn | 3rd | 11th |
| First Basemen | Eddie Stevenson | 5th | Katsura Murakawa | 12th | 5th |
| Second Basemen | Josh Young | 10th | Raul Soto | 9th | 10th |
| Third Basemen | Zadkiel Ryans | 5th | Chris Lifson | 2nd | 5th |
| Shortstops | Virgile Columbana | 12th | Alex Romero | 14th | 12th |
| Left Fielders | Dustin Beaulieu | 5th | Brad McKinnon | 8th | 5th |
| Center Fielders | Mike Stephens | Tied for 9th | Travis Jackson | 15th | 10th |
| Right Fielders | Mark Hensley | 5th | Josh Johnson | 6th | 6th |
| Starting Pitchers | Tony Sunderman | 15th | Jason Bryant | 16th | 15th |
| Relievers | Ryan Hunter | 15th | Mark Dickman | 7th | 15th |
| Closers | Tony Sunderman | 10th | Mark Dickman | 1st | 5th |
