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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Steve Mooney | 4th | Jason Fauerbach | 2nd | 4th |
| First Basemen | Josh Glaser | 7th | Jerry Harris | 2nd | 3rd |
| Second Basemen | Torvald Gomez | 4th | Manny Urquiza | 4th | 4th |
| Third Basemen | Cris Jauregui | 10th | Bill Foreman | 8th | 9th |
| Shortstops | Bobby Pennington | 7th | Juan Sanchez | 5th | 6th |
| Left Fielders | Alex Olvera | 3rd | Alex Sanchez | Tied for 2nd | 1st |
| Center Fielders | Zack Califano | 2nd | Rick Urbina | 5th | 5th |
| Right Fielders | Ryan Ream | 10th | Brandon Rader | Tied for 2nd | 5th |
| Starting Pitchers | Brian Garretson | 7th | Jose Fraga | 15th | 15th |
| Relievers | Cody Reilly | 9th | Alex Gonzales | 13th | 14th |
| Closers | Cody Reilly | 5th | Alex Gonzales | 14th | 13th |
